Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_21109159_21110262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21109159 - 21110262

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTACATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTCTTTTTACAT

Flanking Amino Acid:

DVFAMPQSGTGVSVEAVDPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.9

32.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.5

0.66

0.9

79.3

32.6

Minor 5ss

37.9

-1.4

2.9

51.5

44.9

Minor BPS

57.9

0.33

1.7

75.95

41.3

Associated Gene:

Gene:

PSMD14

Ensembl Gene ID:

ENSAPLG00000007942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038641

21091822 - 21132644

40823

ENSAPLT00000008284

21091822 - 21132644

40823