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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21293372_21295604_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
21293372 - 21295604

Intron Length:
2233

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACAGTTA

5'SS Class:
major

3'SS Sequence:
ATTTAACTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTATTTAACT

Flanking Amino Acid:
TGLAEVPIPTRFLFILLGPL

Intron Amino Acid Position:
338

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1.1
69.2
38

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
78.5
0.64
0.9
71.2
38.9

Minor 5ss
38.6
-1.3
3.6
55.4
48.8

Minor BPS
82.8
1.11
1.3
97
27.3

Associated Gene:

Gene:
SLC4A10

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21180283 - 21330786
150504

21180283 - 21333711
153429