Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_21295693_21296149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21295693 - 21296149

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTTA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTGTTTTTCACA

Flanking Amino Acid:

RSIATLMTDEVFHDVAYKAK

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.6

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

87.4

0.84

0.7

83.5

31.6

Minor 5ss

49.9

-0

2.4

67.2

43.9

Minor BPS

62.5

0.39

1.7

74.03

38.5

Associated Gene:

Gene:

SLC4A10

Ensembl Gene ID:

ENSAPLG00000008328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008740

21180283 - 21333711

153429

ENSAPLT00000046223

21180283 - 21330786

150504