Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_21296297_21297270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21296297 - 21297270

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTACA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTGTAAAGAGCT

Flanking Amino Acid:

IEPPKNVPSQEKRKIPGVPN

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

74.5

35.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

78.3

0.64

0.9

77.2

31.6

Minor 5ss

38.5

-1.3

2.3

44.3

Minor BPS

40.7

-0.6

2.2

64.72

44.6

Associated Gene:

Gene:

SLC4A10

Ensembl Gene ID:

ENSAPLG00000008328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046223

21180283 - 21330786

150504

ENSAPLT00000008740

21180283 - 21333711

153429