Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_21328820_21330662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21328820 - 21330662

Intron Length:

1843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTACTTTTATT

Flanking Amino Acid:

TVQLPLEGHYRDDPSVINIS

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.5

0.71

0.8

74.4

36.1

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

66.6

0.6

1.6

84.49

36.1

Associated Gene:

Gene:

SLC4A10

Ensembl Gene ID:

ENSAPLG00000008328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008740

21180283 - 21333711

153429

ENSAPLT00000046223

21180283 - 21330786

150504