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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21330780_21333707_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
21330780 - 21333707

Intron Length:
2928

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTTAATT

5'SS Class:
major

3'SS Sequence:
TTATTCATTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
TATTTCTTATTC

Flanking Amino Acid:
KEKESSFPSKS*

Intron Amino Acid Position:
1084

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.3
0.34
1.2
71.2
38.2

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
78.7
0.65
0.9
71.3
39.3

Minor 5ss
41.9
-0.9
2.8
58.9
45.1

Minor BPS
67.6
0.53
1.5
74.95
35.8

Associated Gene:

Gene:
SLC4A10

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21180283 - 21333711
153429