Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_21357023_21359735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21357023 - 21359735

Intron Length:

2713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

TCTGGTGTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTGCTTTAATA

Flanking Amino Acid:

EESTTGWIGRFQPSAPYFAP

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

35.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

63.1

0.29

1.2

59.5

45.3

Minor 5ss

34.4

-1.8

3.4

45.6

43.6

Minor BPS

77.4

0.86

1.2

82.68

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009592

21339207 - 21377879

38673