Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_21383197_21384243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21383197 - 21384243

Intron Length:

1047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTTAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTTCTAATTG

Flanking Amino Acid:

KWLINTKVTQRDLLEEYQ*

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

72.3

34.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

28.6

-2.5

2.7

33.4

41.7

Minor BPS

46.8

-0.3

1.9

52.51

43.2

Associated Gene:

Gene:

GCG

Ensembl Gene ID:

ENSAPLG00000010295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010752

21383172 - 21389905

6734