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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21429437_21431067_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21429437 - 21431067

Intron Length:
1631

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTCAGTAAA

5'SS Class:
major

3'SS Sequence:
TTCTTGTCTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AACTCAT

U12 Branch Point Sequence:
GGTGCATGAACT

Flanking Amino Acid:
ISWSPVGHKLAYVYQNNIYL

Intron Amino Acid Position:
162

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1.3
75.9
35.2

Major BPS
78.3
0.7
0.8
77.7
26.1

Major PPT
82.4
0.73
0.8
81.2
30.9

Minor 5ss
30.6
-2.2
2.5
31.1
36.2

Minor BPS
52.6
0.16
1.9
72.22
43.7

Associated Gene:

Gene:
FAP

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21402925 - 21440436
37512