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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21453084_21453598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21453084 - 21453598

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

AGATGCTTACCT

Flanking Amino Acid:

KTVIADDKRKDPFRERIIEI

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

87.5

0.84

0.6

81.1

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

53.2

0.18

2.1

72.08

44.4

Associated Gene:

Gene:

IFIH1

Ensembl Gene ID:

ENSAPLG00000010913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011398

21445510 - 21471606

26097