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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21468656_21471162_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21468656 - 21471162

Intron Length:

2507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

NIFQEEDLERISAVTQTRGN

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.2

0.75

0.9

78.2

39.8

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

IFIH1

Ensembl Gene ID:

ENSAPLG00000010913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011398

21445510 - 21471606

26097