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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21733249_21738655_F

Intron Information:

Intron Rank:

130089

Intron Class:

major

Intron Phase:

Intron Coordinates:

21733249 - 21738655

Intron Length:

5407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCTCTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

100

1.24

0.5

100

Major PPT

81.5

0.71

0.9

83.1

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

62.8

0.26

1.8

73.49

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032216

21732928 - 21738838

5911

ENSAPLT00000029929

21725723 - 21738838

13116