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Intron Name: Anas_platyrhynchos_platyrhynchos_7_219386_219579_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

219386 - 219579

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTTTACTTAATC

Flanking Amino Acid:

FKHDLSKLTDSNCSESRSIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

84.8

0.78

0.8

80.6

31.4

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

0.76

1.4

80.44

33.9

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334