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Intron Name: Anas_platyrhynchos_platyrhynchos_7_219812_220883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

219812 - 220883

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGTATGA

5'SS Class:

major

3'SS Sequence:

GGTGCCGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GGTTTATTGATT

Flanking Amino Acid:

SACHHHHHSQKSHRRKRSRS

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

57.6

38.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

65.8

0.36

1.1

54.1

45.8

Minor 5ss

30.5

-2.2

3.2

38.8

46.3

Minor BPS

57.5

0.32

1.6

73.31

37.4

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334