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Intron Name: Anas_platyrhynchos_platyrhynchos_7_221481_223025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

221481 - 223025

Intron Length:

1545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

GTGTGTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTCTAATGACT

Flanking Amino Acid:

GKVVECIDHKAGGRHVAVKI

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.3

72.7

44.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.4

0.55

70.4

44.5

Minor 5ss

41.1

-1

3.1

54.8

42.5

Minor BPS

48.1

-0

1.9

71.73

38.4

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334