Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_22351678_22351868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22351678 - 22351868

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAGCT

5'SS Class:

major

3'SS Sequence:

TGTGGCCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TATGCATTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

69.1

0.43

0.9

58.9

Minor 5ss

31.4

-2.1

3.7

48.4

47.3

Minor BPS

60.1

0.18

1.8

65.77

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000998

22340804 - 22361225

20422