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Intron Name: Anas_platyrhynchos_platyrhynchos_7_224148_224222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

224148 - 224222

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

ATTTATCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TGATATTTATCT

Flanking Amino Acid:

MAYQICKSVNFLHLNKLTHT

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

74.8

35.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

84.2

0.77

0.8

35.4

Minor 5ss

39.2

-1.2

3.4

45.5

Minor BPS

56.7

0.29

1.8

74.73

41.7

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334