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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22423618_22426610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22423618 - 22426610

Intron Length:

2993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTCCCTTTTTT

Flanking Amino Acid:

SGEAAAKLKRVGPPSNTIAV

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

83.9

30.3

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

0.47

0.9

60.9

35.2

Minor 5ss

40.2

-1.1

49.9

46.4

Minor BPS

45.4

-0.2

3.6

81.55

40.1

Associated Gene:

Gene:

COBLL1

Ensembl Gene ID:

ENSAPLG00000016090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036351

22423531 - 22459739

36209

ENSAPLT00000022552

22423353 - 22502881

79529

ENSAPLT00000048427

22423353 - 22459739

36387

ENSAPLT00000016795

22423531 - 22457678

34148

ENSAPLT00000043736

22423531 - 22502881

79351

ENSAPLT00000037673

22423531 - 22459739

36209