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Intron Name: Anas_platyrhynchos_platyrhynchos_7_224318_224402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

224318 - 224402

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTAATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTCTGTTTAATT

Flanking Amino Acid:

DYTEEYNPKLKRDERTLKNP

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.1

0.72

0.9

78.9

38.5

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

62.1

0.46

1.8

75.88

41.7

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334