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Intron Name: Anas_platyrhynchos_platyrhynchos_7_224533_224863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

224533 - 224863

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AATTTTTTGACA

Flanking Amino Acid:

RHYRAPEVILALGWAQPCDV

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

38.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

76.6

0.6

72.9

41.4

Minor 5ss

30.5

-2.2

2.5

34.7

40.9

Minor BPS

69.3

0.6

1.1

72.64

32.5

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334