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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22617106_22617692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22617106 - 22617692

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATAAAA

Flanking Amino Acid:

FSSVLSVGNLVFTGIFTAEM

Intron Amino Acid Position:

802

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.6

0.6

0.9

74.3

40.5

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

59.9

0.31

1.7

75.18

35.3

Associated Gene:

Gene:

SCN3A

Ensembl Gene ID:

ENSAPLG00000012021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012544

22583591 - 22638295

54705