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Intron Name: Anas_platyrhynchos_platyrhynchos_7_226176_226268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

226176 - 226268

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

TCTATTCATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

YVSRRCKPLKEFMTCQDSDH

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.3

0.39

1.1

68.5

36.6

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

CLK1

Ensembl Gene ID:

ENSAPLG00000016010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016728

217151 - 226484

9334