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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22627515_22629329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22627515 - 22629329

Intron Length:

1815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGATG

5'SS Class:

strong_major

3'SS Sequence:

TGTAACCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TGTTTTGTAACC

Flanking Amino Acid:

QLKKQQEEAQATAAVAAASV

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.3

40.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

63.7

0.31

1.1

45.3

Minor 5ss

35.9

-1.6

3.2

48.4

47.4

Minor BPS

60.1

0.3

74.15

36.9

Associated Gene:

Gene:

SCN3A

Ensembl Gene ID:

ENSAPLG00000012021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012544

22583591 - 22638295

54705