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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22633113_22634637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22633113 - 22634637

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

CGATGCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAA

U12 Branch Point Sequence:

TCTGCTTCGATG

Flanking Amino Acid:

SNPPDWTKNVEYTFTGIYTF

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.9

32.9

Major BPS

0.2

1.3

69.6

37.5

Major PPT

0.41

62.7

42.8

Minor 5ss

40.8

-1

2.8

45.6

43.6

Minor BPS

48.1

-0.2

1.7

53.69

42.4

Associated Gene:

Gene:

SCN3A

Ensembl Gene ID:

ENSAPLG00000012021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012544

22583591 - 22638295

54705