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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22695552_22696040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22695552 - 22696040

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TTTAATCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTGCCTCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.4

67.1

44.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

80.6

0.69

0.9

73.6

36.6

Minor 5ss

39.7

-1.2

49.2

40.2

Minor BPS

65.6

0.57

1.7

79.83

42.7

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277