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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22702179_22702976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22702179 - 22702976

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGACT

5'SS Class:

major

3'SS Sequence:

CTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TCTGCTAAAAAT

Flanking Amino Acid:

QDFWENLYQLTLRAAGKTYM

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

0.9

73.9

36.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

0.83

0.7

80.6

31.4

Minor 5ss

29.6

-2.3

3.1

37.9

40.9

Minor BPS

45.2

-0.2

65.4

45.3

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277