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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22703184_22704517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22703184 - 22704517

Intron Length:

1334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTACATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATGTAGTAAATT

Flanking Amino Acid:

QLKKQQEEAQAAAAAAAADS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

0.43

0.9

62.8

37.9

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

45.1

-0.2

2.4

66.79

44.4

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277