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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22708340_22709363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22708340 - 22709363

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATGATT

5'SS Class:

major

3'SS Sequence:

GTTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

AGTGTTTTATTT

Flanking Amino Acid:

TSPTGQLLPEGTTTETDLRK

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

80.5

33.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

87.9

0.85

0.8

85.4

34.1

Minor 5ss

32.8

-2

3.3

48.4

47.4

Minor BPS

49.8

0.06

1.6

65.87

39.8

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277