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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22713571_22714766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22713571 - 22714766

Intron Length:

1196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TACTGTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTCTCTTTACT

Flanking Amino Acid:

MMVMVIGNLVVLNLFLALLL

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

76.4

0.59

0.8

73.8

36.6

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

72.2

0.78

1.6

89.51

34.3

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277