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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22729418_22733907_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22729418 - 22733907

Intron Length:

4490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTACACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GTTCTTATAATG

Flanking Amino Acid:

RALSRFEGMRVVVNALLGAI

Intron Amino Acid Position:

1076

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

64.8

0.33

57.6

42.6

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

49.9

-0.1

1.6

57.97

37.9

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277