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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22734190_22735735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22734190 - 22735735

Intron Length:

1546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

ATGTGATAAACA

Flanking Amino Acid:

GLGYLSLLQVATFKGWMDIM

Intron Amino Acid Position:

1170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.8

37.5

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

78.3

0.64

0.9

72.4

37.8

Minor 5ss

32.4

-2

3.1

39.7

40.1

Minor BPS

46.5

-0.2

2.3

62.64

43.6

Associated Gene:

Gene:

SCN2A

Ensembl Gene ID:

ENSAPLG00000014616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015276

22695423 - 22742699

47277