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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22888587_22890547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22888587 - 22890547

Intron Length:

1961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCACACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCTTATTCATT

Flanking Amino Acid:

TDETIASLQQARELQARILK

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

67.8

0.4

0.9

60.1

35.3

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

52.4

0.16

76.06

41.3

Associated Gene:

Gene:

TTC21B

Ensembl Gene ID:

ENSAPLG00000012826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013419

22878596 - 22912544

33949