Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_22890655_22892490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22890655 - 22892490

Intron Length:

1836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGAATA

5'SS Class:

major

3'SS Sequence:

ACCATTCTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GCTTGTTTAATA

Flanking Amino Acid:

VLQQALDHEPVNELSSMMED

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

75.2

34.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

75.8

0.58

0.9

68.4

36.7

Minor 5ss

43.3

-0.7

2.9

54.4

Minor BPS

60.1

0.31

1.8

67.25

40.1

Associated Gene:

Gene:

TTC21B

Ensembl Gene ID:

ENSAPLG00000012826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013419

22878596 - 22912544

33949