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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22922915_22930470_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22922915 - 22930470

Intron Length:

7556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATTGTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTACTTTGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATGTTTTTACTT

Flanking Amino Acid:

DNFNQQKKKISQDIFMTEEQ

Intron Amino Acid Position:

1407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

67.8

37.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

67.9

0.4

1.7

77.3

36.6

Minor 5ss

0.07

72.8

38.2

Minor BPS

58.9

0.36

1.6

72.92

39.2

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018532

22919956 - 22988983

69028

ENSAPLT00000016194

22919956 - 22988983

69028

ENSAPLT00000016179

22921464 - 22988983

67520

ENSAPLT00000039202

22919956 - 22988983

69028

ENSAPLT00000016174

22919956 - 22988983

69028

ENSAPLT00000029837

22919956 - 22988983

69028