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Intron Name: Anas_platyrhynchos_platyrhynchos_7_229431_229778_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
229431 - 229778

Intron Length:
348

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGTAA

5'SS Class:
major

3'SS Sequence:
ATTCCTGTTACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTTAT

U12 Branch Point Sequence:
AATTTGTTATTC

Flanking Amino Acid:
VAEQAIKHLKQYSPLLAAFT

Intron Amino Acid Position:
322

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
66.4
35

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
79.2
0.66
0.9
72.5
37.1

Minor 5ss
42.2
-0.9
3.1
55.3
48.9

Minor BPS
47.5
-0.2
2.2
61.12
38.7

Associated Gene:

Gene:
BZW1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

228093 - 235267
7175