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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22949947_22951040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22949947 - 22951040

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTAGT

5'SS Class:

major

3'SS Sequence:

TGTTTTCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TAATTTTTACTT

Flanking Amino Acid:

WCWLDFLIVDVSLVSLTANA

Intron Amino Acid Position:

1301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

76.5

38.6

Major BPS

100

1.24

0.5

100

Major PPT

78.3

0.64

0.9

73.9

35.9

Minor 5ss

-0.4

2.6

64.1

40.5

Minor BPS

59.2

0.37

1.5

73.01

38.5

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016174

22919956 - 22988983

69028

ENSAPLT00000029837

22919956 - 22988983

69028

ENSAPLT00000018532

22919956 - 22988983

69028

ENSAPLT00000016194

22919956 - 22988983

69028

ENSAPLT00000016179

22921464 - 22988983

67520

ENSAPLT00000039202

22919956 - 22988983

69028