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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22953847_22954454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22953847 - 22954454

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTTTGGG

5'SS Class:

major

3'SS Sequence:

CGTTGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTTTCTCAATA

Flanking Amino Acid:

AMEPEACFTEGCVRRFKCCQ

Intron Amino Acid Position:

1191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

57.7

41.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.7

0.47

1.1

70.2

39.4

Minor 5ss

32.8

-2

3.1

40.6

45.6

Minor BPS

69.6

0.61

1.4

77.68

32.8

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029837

22919956 - 22988983

69028

ENSAPLT00000018532

22919956 - 22988983

69028

ENSAPLT00000016194

22919956 - 22988983

69028

ENSAPLT00000016174

22919956 - 22988983

69028

ENSAPLT00000039202

22919956 - 22988983

69028