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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22953959_22958499_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22953959 - 22958499

Intron Length:

4541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

AAACTCTATTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGATCAT

U12 Branch Point Sequence:

TCTAGGTGAAAC

Flanking Amino Acid:

SESDLEESKEFLLNNTSSGN

Intron Amino Acid Position:

1141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

64.2

0.35

1.2

65.8

Major PPT

-0.1

1.7

55.6

43.8

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

39.9

-0.7

2.4

53.07

44.1

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016179

22921464 - 22988983

67520