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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22954573_22958412_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22954573 - 22958412

Intron Length:

3840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTATTTTG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

GKKKKVYSSFKLNMSSSSEG

Intron Amino Acid Position:

1110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.3

58.4

40.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

42.8

-0.8

2.8

57.3

41.2

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016194

22919956 - 22988983

69028