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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22954573_22958499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22954573 - 22958499

Intron Length:

3927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

SESDLEESKEKLNMSSSSEG

Intron Amino Acid Position:

1152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039202

22919956 - 22988983

69028

ENSAPLT00000029837

22919956 - 22988983

69028

ENSAPLT00000018532

22919956 - 22988983

69028

ENSAPLT00000016174

22919956 - 22988983

69028