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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22968655_22973883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22968655 - 22973883

Intron Length:

5229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTTTTTGAAAT

Flanking Amino Acid:

FDWKGYIEDESHFYFLEGQN

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

88.1

25.2

Major BPS

0.75

78.6

Major PPT

77.1

0.61

0.9

34.5

Minor 5ss

-0.9

2.8

55.1

35.9

Minor BPS

67.7

0.64

1.5

85.71

33.9

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016179

22921464 - 22988983

67520

ENSAPLT00000039202

22919956 - 22988983

69028

ENSAPLT00000016174

22919956 - 22988983

69028

ENSAPLT00000038313

22966604 - 22988983

22380

ENSAPLT00000012407

22961042 - 22988983

27942

ENSAPLT00000029837

22919956 - 22988983

69028

ENSAPLT00000018532

22919956 - 22988983

69028