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Intron Name: Anas_platyrhynchos_platyrhynchos_7_22975205_22976887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22975205 - 22976887

Intron Length:

1683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TCCCCTATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TGTGTGTGAACT

Flanking Amino Acid:

SNPPDWTKNVEYVTEFVDLG

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

66.9

Major BPS

72.5

0.56

1.2

39.9

Major PPT

78.5

0.64

0.8

72.1

Minor 5ss

41.8

-0.9

2.8

49.2

41.2

Minor BPS

48.6

-0

2.2

72.98

43.9

Associated Gene:

Gene:

SCN1A

Ensembl Gene ID:

ENSAPLG00000015499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038313

22966604 - 22988983

22380