Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_23059791_23062131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23059791 - 23062131

Intron Length:

2341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CTACCTTTAAAG

Flanking Amino Acid:

ASELQACFTEGCIQKFKCCK

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

73.9

0.54

74.5

40.2

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

0.11

1.5

58.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046065

23046379 - 23091426

45048