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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23662841_23665008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23662841 - 23665008

Intron Length:

2168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCATCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTTCTCATCT

Flanking Amino Acid:

RQCWNGYPYQPLMPDLHYYY

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

33.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.63

0.8

68.7

36.9

Minor 5ss

32.4

-2

3.5

48.3

47.4

Minor BPS

59.4

0.37

1.9

79.56

42.7

Associated Gene:

Gene:

CERS6

Ensembl Gene ID:

ENSAPLG00000011316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021349

23578662 - 23695660

116999

ENSAPLT00000011782

23578662 - 23695660

116999