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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23691520_23695498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23691520 - 23695498

Intron Length:

3979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TCAAATTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCTTCTTCAAAT

Flanking Amino Acid:

AAYKAISKGKVAKDDRSDIE

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

77.3

0.68

81.5

Major PPT

72.7

0.51

65.8

40.3

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

65.6

0.57

1.6

81.38

40.3

Associated Gene:

Gene:

CERS6

Ensembl Gene ID:

ENSAPLG00000011316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011782

23578662 - 23695660

116999