Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_23731985_23733465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23731985 - 23733465

Intron Length:

1481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAAGTTA

5'SS Class:

major

3'SS Sequence:

TTTTCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

GTACTCATAATT

Flanking Amino Acid:

DKKALEATGRISSEALSNIR

Intron Amino Acid Position:

967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

38.3

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

89.3

0.88

0.6

81.8

30.2

Minor 5ss

39.2

-1.2

3.4

46.5

48.9

Minor BPS

56.1

0.27

1.6

72.08

38.4

Associated Gene:

Gene:

ABCB11

Ensembl Gene ID:

ENSAPLG00000009811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010301

23727105 - 23766825

39721