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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23734880_23734976_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
23734880 - 23734976

Intron Length:
97

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATACCA

5'SS Class:
major

3'SS Sequence:
TCTTGAACTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTGTCTTGAACT

Flanking Amino Acid:
LLSFFTQFLQGYTFAKSGEL

Intron Amino Acid Position:
845

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.1
0.69
1
67.2
38

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
74.4
0.55
0.9
66.6
38.5

Minor 5ss
32.3
-2
3
40.9
44.8

Minor BPS
76.1
0.9
1.3
88.77
36.1

Associated Gene:

Gene:
ABCB11

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

23727105 - 23766825
39721