Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_23761657_23761751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23761657 - 23761751

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AAATTTATAATT

Flanking Amino Acid:

EEPSEKKKSEKSPEKKEKIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.1

24.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

74.4

0.55

75.3

33.5

Minor 5ss

35.8

-1.6

2.8

40.3

40.1

Minor BPS

54.7

0.23

1.5

68.94

35.8

Associated Gene:

Gene:

ABCB11

Ensembl Gene ID:

ENSAPLG00000009811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010301

23727105 - 23766825

39721