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Intron Name: Anas_platyrhynchos_platyrhynchos_7_23804458_23805321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23804458 - 23805321

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGTTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTAACTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GCTTTTTTAACT

Flanking Amino Acid:

MYGGTFSMLLGRTGSVLPAL

Intron Amino Acid Position:

4372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.2

56.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

84.5

0.78

0.8

78.6

33.6

Minor 5ss

36.1

-1.6

3.2

41.1

45.2

Minor BPS

76.8

0.92

1.1

83.79

37.4

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986