Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_23827956_23828445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23827956 - 23828445

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGACAT

5'SS Class:

major

3'SS Sequence:

TTTATTTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTATTTGAACA

Flanking Amino Acid:

PRAIVVHPKYGQVYWTDWAD

Intron Amino Acid Position:

3323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

64.3

41.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.1

0.59

73.4

40.7

Minor 5ss

39.3

-1.2

3.1

48.2

47.4

Minor BPS

65.8

0.49

1.4

76.56

34.1

Associated Gene:

Gene:

LRP2

Ensembl Gene ID:

ENSAPLG00000007540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007973

23796334 - 23898319

101986